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Glossary

Protein

Proteins are the workhorses of the body: molecules that build, transport, pass on signals and speed up reactions. They consist of chains of amino acids that fold into a fixed shape.

A protein is a molecule that carries out a task in a living cell. There are proteins that make muscles contract, proteins that carry oxygen through the blood, and proteins that recognise invaders. Your body uses tens of thousands of different kinds.

How does it work?

A protein is a long chain of amino acids, small building blocks of which there are twenty kinds. The order of those building blocks is fixed in the DNA. After it is made, the chain folds up into a three-dimensional shape, a bit like a thread folding into a tangle, but always in the same way. That shape determines the task. Many proteins have a sort of pocket into which exactly one substance fits, like a key in a lock.

A well-known group are the enzymes. These are proteins that start or speed up a chemical reaction. They cut food into smaller pieces, for example, or convert one substance into another. Other proteins are antibodies, which attach to a target and so help with defence.

If the shape is wrong, a protein cannot do its job. In diseases such as Alzheimer's, proteins clump together in a way that causes damage.

Why it matters

Anyone who understands proteins understands a large part of biology and medicine. Many medicines work by blocking a protein or by helping it. That is why protein research is one of the areas where AI is currently advancing fastest.

Chinese researchers had an AI model design proteins from a description in plain language, and in four trials the result did what was asked, such as giving off light and breaking down plastic (link). With BioEmu-2, Microsoft is sharing a model for free that lets researchers predict which shapes a protein can take. That matters, because a protein does not stand still: its movement determines what it can do (link). At Tencent, the research AI Hyra builds its own tools for protein research and mathematics, and models for proteins and molecules are already public (link).

Proteins are versatile in nature too: an enzyme that bacteria in forest soil use to break down bioplastic turns out to render penicillin harmless as well (link).

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